[BO] section
2024 May 27th, updated
[BO] section is required only if you use BO (algo = BO
)
Name | Value | Default | Description |
---|---|---|---|
nselect_bo | int | The number of structures to be selected at once. | |
score | TS , EI , PI | Acquisition function. | |
num_rand_basis | int | 0 | If 0 , Gaussian process. The number of basis function. |
cdev | float | 0.001 | Cutoff of deviation for standardization. |
dscrpt | FP | Structure descriptor. | |
max_select_bo | int | 0 | Maximum number of selection. |
manual_select_bo | int [int …] | None | Structure IDs to be selected manually. |
emax_bo | float | None | Upper limit of energy in BO. |
emin_bo | float | None | Lower limit of energy in BO. |
if decrpt
is FP
CrySPY 1.3.0 or later
fppath
and fp_rmin
are obsolete.
Name | Value | Default | Description |
---|---|---|---|
fp_rmax | float | 8.0 | Only used with dscrpt = FP . Maximum cutoff of r in fingerprint. |
fp_npoints | int | 20 | Only used with dscrpt = FP . Number of discretized points for each pair in fingerprint. |
fp_sigma | float | 0.7 | Only used with dscrpt = FP . Sigma parameter [Å] in Gaussian smearing function. |
CrySPY 1.2.5 or earlyer
Name | Value | Default | Description |
---|---|---|---|
fppath | str | None | Only used with dscrpt = FP . Path of cal_fingerprint. If None , fwpath is automatically searched in your $PATH. |
fp_rmin | float | 0.5 | Only used with dscrpt = FP . Minimum cutoff of r in fingerprint. |
fp_rmax | float | 5.0 | Only used with dscrpt = FP . Maximum cutoff of r in fingerprint. |
fp_npoints | int | 20 | Only used with dscrpt = FP . Number of discretized points for each pair in fingerprint. |
fp_sigma | float | 1.0 | Only used with dscrpt = FP . Sigma parameter [Å] in Gaussian smearing function. |